BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB015A02LP1|AL426762
(1110 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1500 1936 0.0
3x_Contig763 121 2e-27
>3x_Contig1500
Length = 9720
Score = 1936 bits (973), Expect = 0.0
Identities = 1002/1008 (99%), Gaps = 4/1008 (0%)
Strand = Plus / Minus
Query: 1 gatcattgtataaaagcgcacaacataattcacacattctcatgtcattctttcttttaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1015 gatcattgtataaaagcgcacaacataattcacacattctcatgtcattctttcttttaa 956
Query: 61 ctaaaagggcgtagtatgcggtttaccgaacgctgtatggttcatactgatgcattaaca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 955 ctaaaagggcgtagtatgcggtttaccgaacgctgtatggttcatactgatgcattaaca 896
Query: 121 gctatttattacctaatatctatcggatgttcaggtcgaag-ctcaactgtcagtagctc 179
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 895 gctatttattacctaatatctatcggatgttcaggtcgaagactcaactgtcagtagctc 836
Query: 180 tgacgccggacagcaaatgaaaagaaagaaaggaagaaagaaagaacatgactcggaaag 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 835 tgacgccggacagcaaatgaaaagaaagaaaggaagaaagaaagaacatgactcggaaag 776
Query: 240 aaaaattgttttcgagttacataatccacaccgaacaaagtaaaaaagtaacctgtaccc 299
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 775 aaaaattgttttcgagttacataatccacaccgaacaaagtaaaaaagtaacctgtaccc 716
Query: 300 aacgattatgtaatttgcttgaatacccaggagaaaaaaaagagttgttccagacaccca 359
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 715 aacgattatgtaatttgcttgaatacccaggagaaaaaaaagagttgttccagacaccca 656
Query: 360 gacattccattcataagaaaacgctggtgagaaacaaatacgctaattctattggtttac 419
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 655 gacattccattcataagaaaacgctggtgagaaacaaatacgctaattctattggtttac 596
Query: 420 ccggattaggtcacaaaagaaaagaacttccgtgtggccctagatgggcacagactagat 479
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 595 ccggattaggtcacaaaagaaaagaacttccgtgtggccctagatgggcacagactagat 536
Query: 480 gttgatggatcggaaaaatattggaaaagccacgcagacagaagtcatcgactaaagatt 539
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 535 gttgatggatcggaaaaatattggaaaagccacgcagacagaagtcatcgactaaagatt 476
Query: 540 gaagcttagattggaagaagaatgttgagctttattaaactgtccagtggcattaaaatt 599
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 475 gaagcttagattggaagaagaatgttgagctttattaaactgtccagtggcattaaaatt 416
Query: 600 gtatggagttaagtccaagagaaactcaatataatctcaccagcacgatttttcagtgtc 659
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 415 gtatggagttaagtccaagagaaactcaatataatctcaccagcacgatttttcagtgtc 356
Query: 660 taggacaccaagctttttttttttggcaccggtaggtaccttttcagcttaacttctcgg 719
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 355 taggacaccaagctttttttttttggcaccggtaggtaccttttcagcttaacttctcgg 296
Query: 720 tgaccaactttgtgtattgtccctcatctggaagtttctttttccttcatcacactctct 779
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 295 tgaccaactttgtgtattgtccctcatctggaagtttctttttccttcatcacactctct 236
Query: 780 ttttcccattgccctatagaattcatctaatttgtgtgtaaagtccacctcctcaacggc 839
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 235 ttttcccattgccctatagaattcatctaatttgtgtgtaaagtccacctcctcaacggc 176
Query: 840 gttgcatcgtatagattcgactaagaattagcctaaaaccaccaatgcccactgctcttg 899
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 175 gttgcatcgtatagattcgactaagaattagcctaaaaccaccaatgcccactgctcttg 116
Query: 900 ctcttggtctgakataaaggtaaggtaaccttcagaacaaagtttctttttgacagaacg 959
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 115 ctcttggtctgaaataaaggtaaggtaaccttcagaacaaagtttctttttgacagaacg 56
Query: 960 tctaaataaaaaa--caaaatgatgagg-aaacttgctatactgatac 1004
||||||||||||| |||||||||||| |||||||||||||||||||
Sbjct: 55 tctaaataaaaaaacaaaaatgatgaggaaaacttgctatactgatac 8
>3x_Contig763
Length = 2933
Score = 121 bits (61), Expect = 2e-27
Identities = 151/181 (83%)
Strand = Plus / Plus
Query: 628 atataatctcaccagcacgatttttcagtgtctaggacaccaagctttttttttttggca 687
|||||||||||||| ||| |||||| | | | || ||||||| |||||||||||| ||
Sbjct: 236 atataatctcaccatcacaattttttattttttattacaccaatctttttttttttttca 295
Query: 688 ccggtaggtaccttttcagcttaacttctcggtgaccaactttgtgtattgtccctcatc 747
|| || ||||||||| ||||||||||| | ||||||||| | |||| |||||||||
Sbjct: 296 cctttattaaccttttcatcttaacttctcttttaccaactttttttattttccctcatc 355
Query: 748 tggaagtttctttttccttcatcacactctctttttcccattgccctatagaattcatct 807
| || |||||||||||||||||||||||||||||||||||| ||| ||| |||| ||||
Sbjct: 356 tttaattttctttttccttcatcacactctctttttcccatttcccaatataatttatct 415
Query: 808 a 808
|
Sbjct: 416 a 416
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 14,779
Number of Sequences: 1807
Number of extensions: 14779
Number of successful extensions: 93
Number of sequences better than 1.0e-20: 2
length of query: 1110
length of database: 10,358,551
effective HSP length: 16
effective length of query: 1094
effective length of database: 10,329,639
effective search space: 11300625066
effective search space used: 11300625066
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.4 bits)
S2: 50 (100.0 bits)